Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919942.1_cds_XP_016469126.1_61696
CDS Infomation

[gene=LOC107791556] [db_xref=GeneID:107791556] [protein=squalene synthase-like] [protein_id=XP_016469126.1] [location=join(95783..95977,96299..96341,96984..97073,98829..98904,99282..99351,99921..100064,100162..100266,100439..100585,101073..101148,101770..101858,102482..102573,102647..102692,102781..102843)] [gbkey=CDS]
Sequence

ATGGGGAGTTTGAGGGCGATTTTGAAGAATCCAGATGATTTGTATCCATTGGTAAAGCTG
AAGCTAGCGGCTCGACACGCGGAGAAGCAGATCCCGCCGTCTCCACATTGGGGCTTCTGT
TACTCAATGCTTCATAAGGTTTCTCGTAGCTTTGCCCTCGTCATTCAACAACTTCCCGTC
GAGCTTCGTGACGCCGTGTGCATTTTCTATTTGGTTCTTCGAGCACTTGACACTGTTGAG
GATGATACCAGCATTCCCACCGATGTTAAAGTACCTATTCTGATCTCTTTTCATCAGCAT
GTTTATGATCGCGAATGGCATTTTTCATGTGGTACAAAGGAGTACAGGGTTCTCATGGAC
CAGTTGCATCATGTTTCAACTGCTTTTCTGGAGCTTGGGAAACATTATCAGCAGGCAATT
GAGGATATTACCATGAGGATGGGTGCAGGAATGGCAAAATTCATTTGCAAGGAGGTGGAG
ACAACCGATGATTATGATGAATATTGTCACTATGTAGCTGGGCTTGTTGGGCTAGGATTG
TCAAAACTGTTCCATACCTCTGGGAAAGAAGATCTGGCTTCAGATTCTATCTCTAACTCC
ATGGGTTTATTTCTTCAGAAAACAAACATCATTAGAGATTATTTGGAAGACATAAATGAA
GTACCCAAGTGCCGTATGTTCTGGCCCCGTGAGATATGGAGTAAATATGTTAATAAGCTT
GAGGAATTAAAGTACGAGGATAACTCGGCGAAGGCAGTGCAATGTCTCAATGACATGGTC
ACTAATGCTTTATCACATGTAGAAGATTGTTTGACTTACATGTCTGCTTTGCGTGATCCT
TCCATCTTTCGATTCTGTGCTATTCCACAGGTCATGGCAATTGGGACATTAGCTATGTGC
TACGACAACATTGAAGTCTTCAGAGGAGTGGTAAAAATGAGACGTGGTCTGACTGCTAAG
GTCATTGACCGGACCAGGACTATGGCAGATGTATATGGTGCTTTTTTTGACTTTTCTTGT
ATGCTGAAATCCAAGGTTAATAATAATGATCCAAATGCAACAAAAACTCTGAAGAGGCTT
GACGTGATCCTGAAAACTTGCAGAGATTCGGGAACCTTGAACAAAAGGAAATCATACATA
ATCAGGAGCGAGCCTAATTACAGTCCAGTTCTGATTGTCGTCATTTTCATCATACTGGCT
ATTATTCTTGCACAGCTATCTGGAAACCGATCTTAG

Peptide Sequence

PEP ID

XP_016469126.1
PEP Infomation

PREDICTED: squalene synthase-like [Nicotiana tabacum]
Sequence

MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYRVLMD
QLHHVSTAFLELGKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHTSGKEDLASDSISNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
DVILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS

Transcript Sequence

Gene sequence data has not been registered.